探花精选

Ghada Nouairia

Ghada Nouairia

Bitr盲dande Lektor
E-postadress: ghada.nouairia@ki.se
叠别蝉枚办蝉补诲谤别蝉蝉: Karolinska Universitetssjukhuset Huddinge, C177, 14186 Huddinge
Postadress: H7 Medicin, Huddinge, H7 GUT Bergquist, 171 77 Stockholm
Del av:

Om mig

  • Bioinformatician and computational biologist with a background in biology.
    I am a PhD in molecular genetics since 2018 (Carthage University, Tunisia). Driven by curiosity, I moved to explore molecular evolution as a computational biologist in Stockholm University. Now I redirected her skills to the exciting field of clinical research with focus on multiomics data
    analysis of Primary Sclerosing Colangitis (PSC).
    I am also part of the Center for Bioinformatics and Biostatistics (CBB) where I redirect my bioinformatic skills to mentoring and helping others. If you
    need help with bioinformatics or biostatistics, please visit our website (see links section).


    (2018) PhD in molecular genetics from Carthage university, Tunisia
    (2013) Master degree in animal genetics from Carthage university, Tunisia.
    (2010) Engineering degree from Carthage university, Tunisia.

Forskningsbeskrivning

  • Primary sclerosing cholangitis (PSC) is a rare disease of the bile duct. Patients with PSC are very susceptible to develop malignancy (especially
    cholangiocarcinoma and colorectal cancer). We analyse and integrate different types of omics data in order to find new biomarkers for diagnosis and
    prognosis purposes. We also seek to understand the underlying biology and pathways of the disease.

Utvalda publikationer

  • Journal article: JHEP REPORTS. 2025;:101365
    Nouairia G; Cornillet M; Jansson H; Bergquist A; Sparrelid E
  • Article: SCIENTIFIC REPORTS. 2024;14(1):19656
    Jungholm O; Trkulja C; Moche M; Srinivasa SP; Christakopoulou M-N; Davidson M; Reymer A; Jardemark K; Fogaca RL; Ashok A; Jeffries G; Ampah-Korsah H; Strandback E; Andrell J; Nyman T; Nouairia G; Orwar O
  • Journal article: BRITISH JOURNAL OF SURGERY. 2024;111:znae175.019
    Akiki A; Jacobsson H; Nouairia G; Cornillet M; Bjorkstrom NK; Sparrelid E; Taflin H; Jansson H
  • Journal article: ANNALS OF ONCOLOGY. 2024;35:S134
    Nouairia G; Cornillet M; Jansson H; Bergquist A; Sparrelid E

Artiklar

  • Article: NATURE COMMUNICATIONS. 2022;13(1):2700
    Rozman Grinberg I; Mart铆nez-Carranza M; Bimai O; Nouairia G; Shahid S; Lundin D; Logan DT; Sj枚berg B-M; Stenmark P
  • Article: GENES. 2022;13(2):304
    Ben Sassi-Zaidy Y; Mohamed-Brahmi A; Nouairia G; Charfi-Cheikhrouha F; Djemali M; Cassandro M
  • Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2021;297(2):101008
    Schell E; Nouairia G; Steiner E; Weber N; Lundin D; Loderer C
  • Article: JOURNAL OF NEW SCIENCES. 2018;7
    Nouairia G; Cassandro M; Ben larbi M; Viale E; Hammadi M; Yahyaoui MH
  • Article: EMIRATES JOURNAL OF FOOD AND AGRICULTURE. 2015;27(4):362
    Nouairia G; Kdidi S; Ben Salah R; Hammadi M; Khorchani T; Yahyaoui MH
  • Article: JOURNAL OF NEW SCIENCES. 2014;5(https://www.jnsciences.org/agri-biotech/13-volume-5/20-etude-technico-economique-de-methodes-d-extraction-de-l-adn-chez-le-lapin-europeen-oryctolagus-cuniculus-a-partir-du-sang.html)
    Nouairia G; Belarbi M; Yahyaoui MH; Hadded B

Alla 枚vriga publikationer

  • Preprint: MEDRXIV. 2024
    Akiki A; Jacobsson H; Nouairia G; Cornillet M; Bj枚rkstr枚m NK; Sparrelid E; Taflin H; Jansson H
  • Poster: HTTPS://WWW.IPSCSG.ORG/NEWS/SAVE-THE-DATE-FOR-THE-IPSCSG-BIENNIAL-MEETING-IN-STOCKHOLM-2024/. 2024
    Machine-learning based multi-OMICs analysis of circulome from Primary Sclerosing Cholangitis reveals hallmarks associated with cholangiocarcinoma and absence of inflammatory bowel disease
    Nouairia G; Cornillet M; Bergquist A
  • Poster: HTTPS://WWW.OSTI.GOV/SERVLETS/PURL/1558092. 2019
    Class Id MnIVMnIII ribonucleotide reductase from Facklamia ignava
    Rozman-Grinberga I; Nouairia G; Lundin D; Sj枚berg B-M
  • Doctoral thesis: 2018
    Nouairia G; Yahyaoui MH; Hadded B
  • Meeting abstract: HTTPS://WWW.RESEARCHGATE.NET/PUBLICATION/272291464_GENETIC_VARIABILITY_OF_DROMEDARY_CAMEL_IN_TUNISIA_PRELIMINARY_RESULTS. 2014;1
    Nouairia G; Yahyaoui MH; Khorchani B
  • Meeting abstract: HTTPS://PPS.KAZNU.KZ/KZ/MAIN/FILESHOW2/39771/76/3/700/0//. 2013;p63-64(2013):63-64
    Nouairia G; Yahyaoui MH; Khorchani T
  • Licentiate thesis: 2013
    Nouairia G; Yahyaoui MH; Hadded B
  • Licentiate thesis: 2010
    Nouairia G; Belarbi M; Hadded B

Utvalda forskningsbidrag

  • PSC Support
    30 January 2025 - 29 January 2026
  • Ruth och Richard Julins stiftelse
    14 March 2024 - 14 March 2025

Forskningsbidrag

  • Nya biologiska mark枚rer f枚r gallg氓ngscancer, gallbl氓serscancer och prima虉r skleroserande kolangit
    Mag-Tarmfonden
    1 March 2023

础苍蝉迟盲濒濒苍颈苍驳补谤

  • Bitr盲dande Lektor, Medicin, Huddinge, 探花精选, 2024-2030
  • Postdoktor, Medicin, Huddinge, 探花精选, 2022-2024
  • Researcher, Bioinformatics and computational biology, DBB, Stockholm University, 2021-2021

Examina och utbildning

  • Teaching and Learning in Higher Education (GHPD), 探花精选, 2025
  • Career development program in MEDH, Department of Medicine, Huddinge, 探花精选, 2024
  • Fellows in Gender Equal Career Development, Gender equality, equal opportunities, leadership, academic citizenship, LIME, 探花精选, 2024
  • Introduction to Python 鈥 with application to bioinformatics, Programming, Bioinformatics, NBIS 鈥 National Bioinformatics Infrastructure Sweden, 2024
  • Biomarker Discovery: from theory to real world examples, NBIS 鈥 National Bioinformatics Infrastructure Sweden, 2024
  • Cancer Core Europe Summer School in translational cancer research, Translational cancer research, Cancer Core Europe, 2024
  • Train the trainer course, SciLifeLab, 2024
  • Web Course for Doctoral Supervisors, Academic supervision, 探花精选, 2024
  • Course in Neural Networks and Deep Learning, Artificial Intelligence, National Bioinformatics Infrastructure, Sweden, 2023
  • Code Refinery course series (online), Coding, programming, bash, University of Oslo, 2023
  • Interenational course in Bioinformatics and Genomics (MSc. Equivalent), Bioinformatics and genomics, Institut Pasteur de Tunis, 2018
  • PhD in Genetics, Molecular and population genetics, Genetic characterization of Dromedary camel population in Tunisia, Agronomy and Animal husbandry, University of Carthage, 2018
  • Master degree in Animal Genetics, Animal genetics and reproduction, Cross species validation of genetic markers, University of Carthage, 2013
  • Engineering degree in Animal genetics, Animal genetics, Comparison of DNA extraction methods, University of Carthage, 2010

Priser och utm盲rkelser

  • Top student in the International course for Bioinformatics and genomics, Full grades (20 points over 20) and top student (not shared), Institut Pasteur de Tunis, , 2018
  • PhD validation with Very honorable distinction with the board鈥檚 congratulations, Very honorable distinction鈥 with 鈥渢he board鈥檚 congratulations鈥 is the highest distinction for PhD dissertation in Tunisia, Universit茅 Tunis Carthage, 2018
  • MSc. dissertation with First class honor, First class honor is the highest appreciation for master degree dissertations ranked 1st/31 for the class and 1st/80 in all master degree classes, Universit茅 Tunis Carthage, 2013

Handledning

  • Adam Schumacher, Integrating multiomics data for precision medecine in Primary Sclerosing Cholangitis, , 2025
  • Yassine Turki, Predicting stroke from primary healthcare data in Sweden, , 2025
  • Walid Fennani, Developing a parentage test for dromedary camels, , 2017

Uppdrag i kommitt茅

  • Medlem, Organisation committee for the Bioinformaticians network, 探花精选, 2024-
  • Medlem, Organising committee for the Gastro-MedH research day, department of medicine, 探花精选, 2024-2024
  • Medlem, Forskarutbuildningsn盲mnden, Institutionen f枚r Medicin, Huddinge, 探花精选, /en/medh/doctoral-education-at-the-department-of-medicine-huddinge/contact-doctoral-education-the-department-of-medicine-huddinge, 2024-
  • Medlem, European Cooperation in Science and Technology (COST), Precision medicine in biliary tract cancer (Precision-BTC-Network), European Cooperation in Science and Technology, +Name:Working%20Groups%20and%20Medlemship, 2024-

G盲stforskning och resestipendier

  • Wenner-Gren International Postdoc fellowship, Stockholm University, Biochemical and bioinformatics characterization of Ribonucleotide Reductase protein family in the tree of life, 2018-2020
  • Excellence scholarship for PhD students, University of Veterinary Medicine Vienna, 2 months of internship in bioinformatics and population genetics, , 2016-2016
  • Erasmus Mundus, University of Padua, 6 months scholarship for PhD studies, 2015-2016
  • Excellence scholarship for PhD students, Friedrich-Loeffler-Institut, 2 months of internship in bioinformatics and R programming, , 2015-2015

Sakkunniggranskning f枚r vetenskaplig tidskrift

  • Scandinavian journal of Gastroenterology, Taylor and Francis, Anonymous peer review, , 2025
  • Hepatology communications, AASLD, Anonymous peer review, , 2025
  • Acta Theriologica, Springer Nature, Anonymous peer review, , 2019

Expert

  • Other evaluation assignments, Unga forskare, F枚rbundet Unga Forskare, 2025-2025

Konferenser och events

  • Inbjuden f枚redragsh氓llare, Novel tools in bio探花精选 research, Organized by Pr. Mohamed Jemaa from the faculty of Medicine (Tunis, Tunisia), previously affiliated to Lund University, Sweden., Entering the omics era: Is it optional?, 2025
  • Inbjuden f枚redragsh氓llare, AI in bio探花精选 research, Machine Learning and Neural Networks in clinical research, 2025
  • Muntliga presentationer av egna accepterade abstract, International PSC Study Group biannual conference, Stockholm, Sweden, 2024, , Genome-wide methylation profiling of biliary tract cancers reveals pathogenesis mechanisms and clinical applications, 2024
  • Poster-presentationer av egna accepterade abstract, International IPSCSG BIENNIAL MEETING IN STOCKHOLM 2024!, , Machine-learning based multi-OMICs analysis of circulome from Primary Sclerosing Cholangitis reveals hallmarks associated with cholangiocarcinoma and absence of inflammatory bowel disease, 2024
  • Poster-presentationer av egna accepterade abstract, ESMO Gastrointestinal cancers, Munich, Germany, 2024, :~:text=The%20ESMO%20Gastrointestinal%20Cancers%20Congress, new%20data%20in%20GI%20oncology., Serum based test to assist preoperative decision making in suspected gallbladder cancer, , 2024
  • Muntliga presentationer av egna accepterade abstract, Collaboration in Science conference, , Serum based test to assist preoperative decision making in suspected gallbladder cancer, 2024
  • Deltagare, EASL, , 2024
  • Muntliga presentationer av egna accepterade abstract, Elixir Denmark-Danish bioinformatics conference, Aarhus, Denmark. 2023, :~:text=7th%20ANNUAL%20DANISH%20BIOINFORMATICS%20CONFERENCE, tools%20development%20in%20Danish%20bioinformatics., Feature selection for omics-based biomarkers in rare diseases, 2023
  • Muntliga presentationer av egna accepterade abstract, Mayo clinics - 探花精选 joint conference, Rochester, USA. 2023, /en/collaboration/international-collaboration/the-mayo-clinic-and-karolinska-institutet-collaboration/the-mayo-ki-annual-scientific-research-meeting-2023, Genome-wide methylation profiling of biliary tract cancers reveals pathogenesis mechanisms and clinical applications, /en/collaboration/international-collaboration/the-mayo-clinic-and-karolinska-institutet-collaboration/the-mayo-ki-annual-scientific-research-meeting-2023, 2023
  • Muntliga presentationer av egna accepterade abstract, Svenska Gastrodagarna, , Protein biomarker f枚r precis preopertiv diagnos av gallbl氓scancer, 2022
  • Muntliga presentationer av egna accepterade abstract, Collaboration in Science, +in+Science+2022/500346, Using Genome-scale DNA Methylation in Clinical Oncology, 2022
  • Poster-presentationer av egna accepterade abstract, Metals in Biology Gordon research conference. California, USA. 2018, , Class Id MnIVMnIII ribonucleotide reductase from Facklamia ignava, , 2019
  • Muntliga presentationer av egna accepterade abstract, International scientific conference of camel research and production, Al-Khartoum, Sudan. 2017, History and genetic variability of dromedary camel (Camelus dromedarius) revealed by mitochondrial DNA, 2017
  • Muntliga presentationer av egna accepterade abstract, International Seminar on Livestock and Wild animals in Arid lands and Desert. Tunisia, 2014, %20SIEFAD%20020514%20english.pdf, Genetic variability of Camelus dromedarius population in Tunisia using microsatellite markers, , 2014
  • Poster-presentationer av egna accepterade abstract, International conference on Sustainability of Camel population and Production. King Faisal University Al-Hasa, Saudi Arabia, 2013, , Amplification of alpaca tetranucleotide microsatellite markers in dromedary camel (Camelus dromedarius), , 2013

Nyheter fr氓n KI

Kalenderh盲ndelser fr氓n KI

Presentationer