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Laboratory of Lymphocyte Differentiation – Jonathan Coquet Group

The Coquet and Martinez Gonzalez groups are focused on the study of T cell and Innate Lymphoid Cell (ILC) biology. We study activation, differentiation and memory formation primarily in the context of allergy and cancer. Identifying critical signals that induce the differentiation of T cells and ILC and their maintenance at tissue sites is our main interest. Strengths include preclinical models of infection, allergy and cancer as well as single cell RNA-Sequencing and flow cytometric analysis.

Research Description

T cells recognise peptide/lipid ligands presented in the context of MHC or MHC-like molecules expressed on antigen presenting cells. In particular, the group has a special focus on CD4 T cells, which when activated differentiate into T helper cells with potent cytokine-secreting function. Over the past three decades, several distinct T helper cell subsets have been described including Th1, Th2, Th17, Treg and others and these all exert quite unique immune modulatory effects. My group has many interests, including:

  • Understanding how T helper cells promote health and disease
  • Deciphering factors that regulate T helper cell function and differentiation
  • Phenotyping T helper cells in lymphoid and non-lymphoid tissues in diseased and healthy contexts
  • Probing for other functionalities in the T helper cell spectrum
  • Understanding how environmental factors may impact on T helper cell functions
An illustration
Illustration Jonathan Coquet group webpage

Allergy

Our group is interested in understanding immune responses to allergens. T helper cells, in particular IL-4, IL-5 and IL-13 producing Th2 cells have a central role in mediating the pathogenesis of asthma. Over the last few years, we have demonstrated that these cells are characterised by the high expression of genes associated with lipid metabolism including PPAR-g, which likely regulates metabolism in Th2 cells and also promotes effector gene expression.

Many other T helper cell subsets are thought to regulate asthma, especially in adults, and we are interested in characterising T helper cells in different phenotypes of asthma and allergy. Right now, we have a focus on performing single cell RNA-Sequencing analyses in different clinical and preclinical contexts, in order to paint a really clear picture of the T helper cell phenotype in different allergies.

An important factor in the striking rise in allergy incidence over the last few decades has been a complete upheaval in our way of life. Our infectious landscape, diets, living conditions and many other things have changed dramatically over this time, and many of these factors are associated with a rise in the incidence of allergies. We are now devoting more time into understanding how some of these factors from our environment may be affecting allergic sensitisation and aiming to model these in our preclinical allergy models.

Cancer

There is an increasing appreciation that the immune system is intricately involved in the process of cancer initiation and growth. The bulk of research into cancer immunology has focussed on the role of CD8 T cells, and for good reason. However, understanding the role of CD4 T cells and harnessing their full potential is likely to lead to even better outcomes for patients with cancer. Our group is actively pursuing the elucidation of novel genes that may regulate the function of CD8 T lymphocytes in cancer. Further, we are interested in understanding more fully what impact CD4 T cells may have on the process of cancer development, and how these cells may be harnessed to potentiate cancer immunotherapy.

Recruitment

We are always looking for enthusiastic researchers to join the group, so don’t be afraid to contact Jonathan Coquet on the email address below.

News from the group

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Publications

All publications from group members

  • Article: NATURE COMMUNICATIONS. 2024;15(1):10607
    Long S; Guzyk M; Vidakovics LP; Han X; Sun R; Wang M; Panas MD; Urgard E; Coquet JM; Merits A; Achour A; Mcinerney GM
  • Article: JOURNAL OF INVESTIGATIVE DERMATOLOGY. 2024;144(12):2789-2804.e10
    Zeng Z; Vadivel CK; Gluud M; Namini MRJ; Yan L; Ahmad S; Hansen MB; Coquet J; Mustelin T; Koralov SB; Bonefeld CM; Woetmann A; Geisler C; Guenova E; Kamstrup MR; Litman T; Gjerdrum L-MR; Buus TB; Odum N
  • Review: CURRENT OPINION IN IMMUNOLOGY. 2024;91:102500
    Tibbitt CA; Coquet JM
  • Article: JOURNAL OF EXPERIMENTAL MEDICINE (JEM). 2024;221(8):e20231827
    Matha L; Krabbendam L; Hoyer SM; Heesters BA; Golebski K; Kradolfer C; Ghaedi M; Ma J; Stadhouders R; Bachert C; Cardell L-O; Zhang N; Holtappels G; Reitsma S; Helgers LC; Geijtenbeek TBH; Coquet JM; Takei F; Spits H; Martinez-Gonzalez I
  • Review: IMMUNOLOGICAL REVIEWS. 2024;323(1):118-125
    Martinez-Gonzalez I; Takei F
  • Article: IMMUNOLOGY AND CELL BIOLOGY. 2024;102(4):232-234
    Peperzak V; Coquet JM
  • Article: FRONTIERS IN PHARMACOLOGY. 2024;15:1503648
    Dong C; Liu J; Quaranta A; Jing X; Nie M; Wheelock CE; Murrell B; Coquet JM; Bowden TM; Engstrand T; Adner M
  • Article: CLINICAL & TRANSLATIONAL IMMUNOLOGY. 2024;13(5):e1508
    Dopico XC; Guryleva M; Mandolesi M; Corcoran M; Coquet JM; Murrell B; Hedestam GBK
  • Journal article: MICROBIOLOGY SPECTRUM. 2023;11(6):e02657-e02623
    Pavez VB; Pacheco N; Castro-Severyn J; Pardo-Esté C; Álvarez J; Zepeda P; Krüger G; Gallardo K; Melo F; Vernal R; Aranda C; Remonsellez F; Saavedra CP
  • Article: JOURNAL OF EXPERIMENTAL MEDICINE (JEM). 2023;220(11):e20230101
    Aoun M; Coelho A; Krämer A; Saxena A; Sabatier P; Beusch CM; Lönnblom E; Geng M; Do N-N; Xu Z; Zhang J; He Y; Romero Castillo L; Abolhassani H; Xu B; Viljanen J; Rorbach J; Fernandez Lahore G; Gjertsson I; Kastbom A; Sjöwall C; Kihlberg J; Zubarev RA; Burkhardt H; Holmdahl R
  • Preprint: BIORXIV. 2023
    Mathä L; Krabbendam L; Martinez-Høyer S; Heesters B; Golebski K; Kradolfer CMA; Ghaedi M; Ma J; Stadhouders R; Bachert C; Cardell LO; Nan Z; Holtappels G; Helgers LC; Geijtenbeek TBH; Coquet JM; Takei F; Spits H; Martinez-Gonzalez I
  • Article: IMMUNOLOGY AND CELL BIOLOGY. 2023;101(10):936-946
    Melen E; Lambrecht BN; Lloyd CM; Rothenberg ME; Kabashima K; Luciani F; Coquet JM; Ober C; Nawijn MC; Platts-Mills T; von Mutius E
  • Journal article: MBIO. 2023;14(5):e01174-e01123
    Luo X; Fang G; Chen K; Song Y; Lu T; Tomberlin JK; Zhan S; Huang Y
  • Article: SCIENCE IMMUNOLOGY. 2023;8(87):eadf7702
    Ma J; Urgard E; Runge S; Classon CH; Mathae L; Stark JM; Cheng L; Alvarez JA; Von Zedtwitz S; Baleviciute A; Hoyer SM; Li M; Gernand AM; Osbelt L; Bielecka AA; Lesker TR; Huang H-J; Vrtala S; Boon L; Beyaert R; Adner M; Gonzalez IM; Strowig T; Du J; Nylen S; Rosshart SP; Coquet JM
  • Editorial comment: IMMUNOLOGY AND CELL BIOLOGY. 2023;101(7):598-599
    Coquet JM
  • Article: NATURE METABOLISM. 2023;5(7):1188-1203
    Barreby E; Strunz B; Nock S; Naudet L; Shen JX; Johansson H; Soennerborg I; Ma J; Urgard E; Pallett LJ; Hu Y; Fardellas A; Azzimato V; Vankova A; Levi L; Morgantini C; Maini MK; Stal P; Rosshart SP; Coquet JM; Nowak G; Naeslund E; Lauschke VM; Ellis E; Bjoerkstroem NK; Chen P; Aouadi M
  • Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2023;120(25):e2218668120
    Urbonaviciute V; Romero-Castillo L; Xu B; Luo H; Schneider N; Weisse S; Do N-N; Oliveira-Coelho A; Fernandez Lahore G; Li T; Sabatier P; Beusch CM; Viljanen J; Zubarev RA; Kihlberg J; Bäcklund J; Burkhardt H; Holmdahl R
  • Journal article: ELIFE. 2023;12:e82626
    Labuz DR; Lewis G; Fleming ID; Thompson CM; Zhai Y; Firpo MA; Leung DT
  • Journal article: IMMUNOHORIZONS. 2023;7(1):116-124
    Labuz D; Cacioppo J; Li K; Aubé J; Leung DT
  • Article: NATURE METABOLISM. 2022;4(12):1674-1683
    Jing X; Wu J; Dong C; Gao J; Seki T; Kim C; Urgard E; Hosaka K; Yang Y; Long S; Huang P; Zheng J; Szekely L; Zhang Y; Tao W; Coquet J; Ge M; Chen Y; Adner M; Cao Y
  • Thesis / dissertation: 2022
    Ma, Junjie
  • Article: ALLERGY. EUROPEAN JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 2022;77(10):2987-3001
    Stark JM; Liu J; Tibbitt CA; Christian M; Ma J; Wintersand A; Dunst J; Kreslavsky T; Murrell B; Adner M; Gronlund H; Gafvelin G; Coquet JM
  • Letter: NATURE IMMUNOLOGY. 2022;23(4):501-502
    Jankovic D; Ciucci T; Coffman RL; Coquet JM; Le Gros G; Mosmann TR; Sher A; Ronchese F
  • Article: SCIENCE ADVANCES. 2022;8(12):eabm0220
    Hanke L; Sheward DJ; Pankow A; Vidakovics LP; Karl V; Kim C; Urgard E; Smith NL; Astorga-Wells J; Ekstrom S; Coquet JM; McInerney GM; Murrell B
  • Article: BLOOD ADVANCES. 2022;6(6):1780-1796
    Stalmann USA; Ticconi F; Snoeren IAM; Li R; Gleitz HFE; Cowley GS; McConkey ME; Wong AB; Schmitz S; Fuchs SNR; Sood S; Leimkuehler NB; Martinez-Hoyer S; Banjanin B; Root D; Bruemmendorf TH; Pearce JE; Schuppert A; Bindels EMJ; Essers MA; Heckl D; Stiehl T; Costa IG; Ebert BL; Schneider RK
  • Article: MUCOSAL IMMUNOLOGY. 2022;15(2):257-267
    Classon CH; Li M; Clavero AL; Ma J; Feng X; Tibbitt CA; Stark JM; Cardoso R; Ringqvist E; Boon L; Villablanca EJ; Rothfuchs AG; Eidsmo L; Coquet JM; Nylen S
  • Article: NATURE COMMUNICATIONS. 2022;13(1):155
    Hanke L; Das H; Sheward DJ; Vidakovics LP; Urgard E; Moliner-Morro A; Kim C; Karl V; Pankow A; Smith NL; Porebski B; Fernandez-Capetillo O; Sezgin E; Pedersen GK; Coquet JM; Hallberg BM; Murrell B; McInerney GM
  • Review: FRONTIERS IN IMMUNOLOGY. 2022;13:877005
    Mathae L; Takei F; Martinez-Gonzalez I
  • Article: CLINICAL & TRANSLATIONAL IMMUNOLOGY. 2022;11(3):e1379
    Dopico XC; Muschiol S; Grinberg NF; Aleman S; Sheward DJ; Hanke L; Ahl M; Vikstrom L; Forsell M; Coquet JM; McInerney G; Dillner J; Bogdanovic G; Murrell B; Albert J; Wallace C; Hedestam GBK
  • Journal article: FRONTIERS IN ALLERGY. 2022;3:1062412
    Trivedi S; Labuz D; Deering-Rice CE; Kim CU; Christensen H; Aamodt S; Huecksteadt T; Sanders K; Warren KJ
  • Article: ANTIOXIDANTS. 2021;10(12):1936
    Checa J; Martinez-Gonzalez I; Maqueda M; Mosquera JL; Aran JM
  • Article: CELL REPORTS MEDICINE. 2021;2(11):100450
    Sheward DJ; Mandolesi M; Urgard E; Kim C; Hanke L; Vidakovics LP; Pankow A; Smith NL; Dopico XC; McInerney GM; Coquet JM; Hedestam GBK; Murrell B
  • Review: CURRENT ALLERGY AND ASTHMA REPORTS. 2021;21(11):45
    Stark JM; Coquet JM; Tibbitt CA
  • Article: NATURE COMMUNICATIONS. 2021;12(1):5565
    Lahore GF; Forster M; Johannesson M; Sabatier P; Lonnblom E; Aoun M; He Y; Nandakumar KS; Zubarev RA; Holmdahl R
  • Article: SCIENCE IMMUNOLOGY. 2021;6(62):eabg6356
    Ma J; Tibbitt CA; Georen SK; Christian M; Murrell B; Cardell L-O; Bachert C; Coquet JM
  • Thesis / dissertation: 2021
    Fernandez Lahore, Gonzalo
  • Article: CLINICAL AND TRANSLATIONAL MEDICINE. 2021;11(6):e427
    Laanesoo A; Urgard E; Periyasamy K; Laan M; Bochkov YA; Aab A; Magilnick N; Pooga M; Gern JE; Johnston SL; Coquet JM; Boldin MP; Wengel J; Altraja A; Bochenek G; Jakiela B; Rebane A
  • Article: COMMUNICATIONS BIOLOGY. 2021;4(1):590
    Ferrarini MG; Lal A; Rebollo R; Gruber AJ; Guarracino A; Gonzalez IM; Floyd T; de Oliveira DS; Shanklin J; Beausoleil E; Pusa T; Pickett BE; Aguiar-Pulido V
  • Article: NATURE COMMUNICATIONS. 2021;12(1):2474
    Docking TR; Parker JDK; Jadersten M; Duns G; Chang L; Jiang J; Pilsworth JA; Swanson LA; Chan SK; Chiu R; Nip KM; Mar S; Mo A; Wang X; Martinez-Hoyer S; Stubbins RJ; Mungall KL; Mungall AJ; Moore RA; Jones SJM; Birol I; Marra MA; Hogge D; Karsan A
  • Article: CELL REPORTS MEDICINE. 2021;2(4):100252
    Mandolesi M; Sheward DJ; Hanke L; Ma J; Pushparaj P; Vidakovics LP; Kim C; Adori M; Lenart K; Lore K; Dopico XC; Coquet JM; McInerney GM; Hedestam GBK; Murrell B
  • Article: IMMUNOLOGY AND CELL BIOLOGY. 2021;99(2):234-243
    Rohrbeck L; Adori M; Wang S; He C; Tibbitt CA; Chernyshev M; Sirel M; Ribacke U; Murrell B; Bohlooly-Y M; Karlsson MCI; Karlsson Hedestam GB; Coquet JM
  • Article: SCIENCE IMMUNOLOGY. 2021;6(55):eabd3489
    van der Ploeg EK; Golebski K; van Nimwegen M; Fergusson JR; Heesters BA; Martinez-Gonzalez I; Kradolfer CMA; van Tol S; Scicluna BP; de Bruijn MJW; de Boer GM; Tramper-Stranders GA; Braunstahl G-J; van IJcken WFJ; Nagtegaal AP; van Drunen CM; Fokkens WJ; Huylebroeck D; Spits H; Hendriks RW; Stadhouders R; Bal SM
  • Article: NATURE COMMUNICATIONS. 2021;12(1):610
    Norin U; Rintisch C; Meng L; Forster F; Ekman D; Tuncel J; Klocke K; Backlund J; Yang M; Bonner MY; Lahore GF; James J; Shchetynsky K; Bergquist M; Gjertsson I; Hubner N; Backdahl L; Holmdahl R
  • Review: FRONTIERS IN IMMUNOLOGY. 2021;12:671966
    Matha L; Martinez-Gonzalez I; Steer CA; Takei F
  • Corrigendum: PLOS ONE. 2021;16(5):e0252257
    Mathae L; Shim H; Steer CA; Yin YH; Martinez-Gonzalez I; Takei F
  • Article: FRONTIERS IN IMMUNOLOGY. 2021;12:679509
    Matha L; Romera-Hernandez M; Steer CA; Yin YH; Orangi M; Shim H; Chang C; Rossi FM; Takei F
  • Article: BIOMATERIALS. 2020;262:120316
    Carreras-Badosa G; Maslovskaja J; Periyasamy K; Urgard E; Padari K; Vaher H; Tserel L; Gestin M; Kisand K; Arukuusk P; Lou C; Langel Ü; Wengel J; Pooga M; Rebane A
  • Journal article: ELIFE. 2020;9:e55615
    Trivedi S; Labuz D; Anderson CP; Araujo CV; Blair A; Middleton EA; Jensen O; Tran A; Mulvey MA; Campbell RA; Hale JS; Rondina MT; Leung DT
  • Article: EXPERIMENTAL HEMATOLOGY. 2020;91:22-31
    Martinez-Hoyer S; Karsan A
  • Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2020;117(40):24986-24997
    Lahore GF; Raposo B; Lagerquist M; Ohlsson C; Sabatier P; Xu B; Aoun M; James J; Cai X; Zubarev RA; Nandakumar KS; Holmdahl R
  • Journal article: EXPERIMENTAL HEMATOLOGY. 2020;88:s72
    Martinez-Høyer S; Deng Y; Parker J; Jiang J; Docking R; Mo A; Gharaee N; Jädersten M; Kulasekararaj A; Malcovati L; List A; Hellström-Lindberg E; Platzbecker U; Karsan A
  • Article: JCI INSIGHT. 2020;5(14):135961
    Steer CA; Matha L; Shim H; Takei F
  • Editorial comment: SCIENCE IMMUNOLOGY. 2020;5(48):eabc4021
    Coquet JM
  • Article: NATURE CELL BIOLOGY. 2020;22(5):526-533
    Martinez-Hoyer S; Deng Y; Parker J; Jiang J; Mo A; Docking TR; Gharaee N; Li J; Umlandt P; Fuller M; Jadersten M; Kulasekararaj A; Malcovati L; List AF; Hellstrom-Lindberg E; Platzbecker U; Karsan A
  • Article: JOURNAL OF EXPERIMENTAL MEDICINE (JEM). 2020;217(3):e20182293
    Ghaedi M; Shen ZY; Orangi M; Martinez-Gonzalez I; Wei L; Lu X; Das A; Heravi-Moussavi A; Marra MA; Bhandoola A; Takei F
  • Article: IMMUNITY, INFLAMMATION AND DISEASE. 2020;8(1):8-23
    Batyrova B; Luwaert F; Maravelia P; Miyabayashi Y; Vashist N; Stark JM; Soori SY; Tibbitt CA; Riese P; Coquet JM; Chambers BJ
  • Conference publication: EXPERIMENTAL HEMATOLOGY. 2020;88:S72
    Martinez-Hoyer S; Deng Y; Parker J; Jiang J; Docking R; Mo A; Gharaee N; Jadersten M; Kulasekararaj A; Malcovati L; List A; Hellstrom-Lindberg E; Platzbecker U; Karsan A
  • Article: ALLERGY. EUROPEAN JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 2019;74(11):2146-2156
    Vaher H; Runnel T; Urgard E; Aab A; Carreras Badosa G; Maslovskaja J; Abram K; Raam L; Kaldvee B; Annilo T; Tkaczyk ER; Maimets T; Akdis CA; Kingo K; Rebane A
  • Corrigendum: JOURNAL OF EXPERIMENTAL MEDICINE (JEM). 2019;216(9):2221-2222
    Nagasawa M; Heesters BA; Kradolfer CMA; Krabbendam L; Martinez-Gonzalez I; de Bruijn MJW; Golebski K; Hendriks RW; Stadhouders R; Spits H; Bal SM
  • Article: JOURNAL OF EXPERIMENTAL MEDICINE (JEM). 2019;216(8):1762-1776
    Nagasawa M; Heesters BA; Kradolfer CMA; Krabbendam L; Martinez-Gonzalez I; de Bruijn MJW; Golebski K; Hendriks RW; Stadhouders R; Spits H; Bal SM
  • Article: IMMUNITY. 2019;51(1):169-184.e5
    Tibbitt CA; Stark JM; Martens L; Ma J; Mold JE; Deswarte K; Oliynyk G; Feng X; Lambrecht BN; De Bleser P; Nylen S; Hammad H; Henriksson MA; Saeys Y; Coquet JM
  • Article: CURRENT PROTOCOLS IN IMMUNOLOGY. 2019;125(1):e73
    Romera-Hernández M; Mathä L; Steer CA; Ghaedi M; Takei F
  • Article: JOURNAL OF AUTOIMMUNITY. 2019;98:86-94
    Seitz C; Liu S; Klocke K; Joly A-L; Czarnewski PV; Tibbitt CA; Parigi SM; Westerberg LS; Coquet JM; Villablanca EJ; Wing K; Andersson J
  • Review: FRONTIERS IN IMMUNOLOGY. 2019;10:2318
    Stark JM; Tibbitt CA; Coquet JM
  • Article: ONCOIMMUNOLOGY. 2019;8(2):e1527497
    Halvorsen EC; Franks SE; Wadsworth BJ; Harbourne BT; Cederberg RA; Steer CA; Martinez-Gonzalez I; Calder J; Lockwood WW; Bennewith KL
  • Article: PLOS ONE. 2019;14(3):e0214286
    Matha L; Shim H; Steer CA; Yin YH; Martinez-Gonzalez I; Takei F
  • Meeting abstract: BLOOD. 2018;132:176
    Martinez-Hoyer S; Mo A; Deng D; Jiang J; Docking R; Li J; Chan S; Umlandt P; Fuller M; Jadersten M; Hellstrom-Lindberg E; Platzbecker U; Parker J; Karsan A
  • Article: ARTERIOSCLEROSIS, THROMBOSIS, AND VASCULAR BIOLOGY. 2018;38(8):E145-E158
    Centa M; Prokopec KE; Garimella MG; Habir K; Hofste L; Stark JM; Dahdah A; Tibbitt CA; Polyzos KA; Gistera A; Johansson DK; Maeda NN; Hansson GK; Ketelhuth DFJ; Coquet JM; Binder CJ; Karlsson MCI; Malin S
  • Article: NATURE COMMUNICATIONS. 2018;9(1):2418
    Lam J; van den Bosch M; Wegrzyn J; Parker J; Ibrahim R; Slowski K; Chang L; Martinez-Hoyer S; Condorelli G; Boldin M; Deng Y; Umlandt P; Fuller M; Karsan A
  • Article: PLOS PATHOGENS. 2018;14(5):e1007008
    Feng X; Classon C; Teran G; Yang Y; Li L; Chan S; Ribacke U; Rothfuchs AG; Coquet JM; Nylen S
  • Review: IMMUNOLOGICAL REVIEWS. 2018;283(1):41-53
    Martinez-Gonzalez I; Ghaedi M; Steer CA; Matha L; Vivier E; Takei F
  • Article: JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 2018;141(1):300-310.e11
    Sugita K; Steer CA; Martinez-Gonzalez I; Altunbulakli C; Morita H; Castro-Giner F; Kubo T; Wawrzyniak P; Ruckert B; Sudo K; Nakae S; Matsumoto K; O'Mahony L; Akdis M; Takei F; Akdis CA
  • Article: NUCLEIC ACID THERAPEUTICS. 2017;27(5):295-302
    Urgard E; Brjalin A; Langel Ü; Pooga M; Rebane A; Annilo T
  • Article: JOURNAL OF INVESTIGATIVE DERMATOLOGY. 2017;137(9):1945-1954
    Hermann H; Runnel T; Aab A; Baurecht H; Rodriguez E; Magilnick N; Urgard E; Šahmatova L; Prans E; Maslovskaja J; Abram K; Karelson M; Kaldvee B; Reemann P; Haljasorg U; Rückert B; Wawrzyniak P; Weichenthal M; Mrowietz U; Franke A; Gieger C; Barker J; Trembath R; Tsoi LC; Elder JT; Tkaczyk ER; Kisand K; Peterson P; Kingo K; Boldin M; Weidinger S; Akdis CA; Rebane A
  • Letter: JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 2017;140(2):593-595.e3
    Steer CA; Martinez-Gonzalez I; Ghaedi M; Allinger P; Mathae L; Takei F
  • Editorial comment: IMMUNOLOGY AND CELL BIOLOGY. 2017;95(7):571-572
    Coquet JM
  • Review: TRENDS IN IMMUNOLOGY. 2017;38(6):423-431
    Martinez-Gonzalez I; Matha L; Steer CA; Takei F
  • Meeting abstract: LEUKEMIA RESEARCH. 2017;55:S43-S44
    Martinez-Hoyer S; Mo A; Docking R; Li J; Chan S; Umlandt P; Fuller M; Jadersten M; Hellstrom-Lindberg E; Platzbecker U; Parker J; Karsan A
  • Article: SCIENCE IMMUNOLOGY. 2017;2(9):eaal5196
    Chen T; Tibbitt CA; Feng X; Stark JM; Rohrbeck L; Rausch L; Sedimbi SK; Karlsson MCI; Lambrecht BN; Hedestam GBK; Hendriks RW; Chambers BJ; Nylen S; Coquet JM
  • Article: JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 2017;139(2):388-399
    Anto JM; Bousquet J; Akdis M; Auffray C; Keil T; Momas I; Postma DS; Valenta R; Wickman M; Cambon-Thomsen A; Haahtela T; Lambrecht BN; Carlsen KCL; Koppelman GH; Sunyer J; Zuberbier T; Annesi-Maesano I; Arno A; Bindslev-Jensen C; De Carlo G; Forastiere F; Heinrich J; Kowalski ML; Maier D; Melen E; Smit HA; Standl M; Wright J; Asarnoj A; Benet M; Ballardini N; Garcia-Aymerich J; Gehring U; Guerra S; Hohmann C; Kull I; Lupinek C; Pinart M; Skrindo I; Westman M; Smagghe D; Akdis C; Andersson N; Bachert C; Ballereau S; Ballester F; Basagana X; Bedbrook A; Bergstrom A; von Berg A; Brunekreef B; Burte E; Carlsen K-H; Chatzi L; Coquet JM; Curin M; Demoly P; Eller E; Fantini MP; von Hertzen L; Hovland V; Jacquemin B; Just J; Keller T; Kiss R; Kogevinas M; Koletzko S; Lau S; Lehmann I; Lemonnier N; Maekelae M; Mestres J; Mowinckel P; Nadif R; Nawijn MC; Pellet J; Pin I; Porta D; Ranciere F; Rial-Sebbag E; Saeys Y; Schuijs MJ; Siroux V; Tischer CG; Torrent M; Varraso R; Wenzel K; Xu C-J
  • Article: CANCER CELL INTERNATIONAL. 2017;17:18
    Urgard E; Reigo A; Reinmaa E; Rebane A; Metspalu A
  • Corrigendum: PLOS ONE. 2017;12(1):e0170833
    Lokk K; Vooder T; Kolde R; Välk K; Võsa U; Roosipuu R; Milani L; Fischer K; Koltsina M; Urgard E; Annilo T; Metspalu A; Tõnisson N
  • Review: ALLERGY. EUROPEAN JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 2016;71(11):1513-1525
    Bousquet J; Anto JM; Akdis M; Auffray C; Keil T; Momas I; Postma DS; Valenta R; Wickman M; Cambon-Thomsen A; Haahtela T; Lambrecht BN; Carlsen KCL; Koppelman GH; Sunyer J; Zuberbier T; Annesi-Maesano I; Arno A; Bindslev-Jensen C; De Carlo G; Forastiere F; Heinrich J; Kowalski ML; Maier D; Melen E; Palkonen S; Smit HA; Standl M; Wright J; Asarnoj A; Benet M; Ballardini N; Garcia-Aymerich J; Gehring U; Guerra S; Hohman C; Kull I; Lupinek C; Pinart M; Skrindo I; Westman M; Smagghe D; Akdis C; Albang R; Anastasova V; Anderson N; Bachert C; Ballereau S; Ballester F; Basagana X; Bedbrook A; Bergstrom A; von Berg A; Brunekreef B; Burte E; Carlsen KH; Chatzi L; Coquet JM; Curin M; Demoly P; Eller E; Fantini MP; Gerhard B; Hammad H; von Hertzen L; Hovland V; Jacquemin B; Just J; Keller T; Kerkhof M; Kiss R; Kogevinas M; Koletzko S; Lau S; Lehmann I; Lemonnier N; McEachan R; Makela M; Mestres J; Minina E; Mowinckel P; Nadif R; Nawijn M; Oddie S; Pellet J; Pin I; Porta D; Ranciere F; Rial-Sebbag A; Saeys Y; Schuijs MJ; Siroux V; Tischer CG; Torrent M; Varraso R; De Vocht J; Wenger K; Wieser S; Xu C
  • Article: JOURNAL OF EXPERIMENTAL MEDICINE (JEM). 2016;213(10):1973-1981
    Drennan MB; Govindarajan S; Verheugen E; Coquet JM; Staal J; McGuire C; Taghon T; Leclercq G; Beyaert R; van Loo G; Lambrecht BN; Elewaut D
  • Article: JOURNAL OF IMMUNOLOGY. 2016;197(6):2261-2268
    Carow B; Gao Y; Coquet J; Reilly M; Rottenberg ME
  • Article: JOURNAL OF CONTROLLED RELEASE. 2016;235:195-204
    Urgard E; Lorents A; Klaas M; Padari K; Viil J; Runnel T; Langel K; Kingo K; Tkaczyk E; Langel U; Maimets T; Jaks V; Pooga M; Rebane A
  • Journal article: ELIFE. 2016;5:e14243
    Tramantano M; Sun L; Au C; Labuz D; Liu Z; Chou M; Shen C; Luk E
  • Article: IMMUNITY. 2016;45(1):198-208
    Martinez-Gonzalez I; Matha L; Steer CA; Ghaedi M; Poon GFT; Takei F
  • Journal article: INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS. 2016;47(5):403-409
    Bravo-Toncio C; Álvarez JA; Campos F; Ortíz-Severín J; Varas M; Cabrera R; Lagos CF; Chávez FP
  • Article: CELL REPORTS. 2016;15(3):471-480
    Ghaedi M; Steer CA; Martinez-Gonzalez I; Halim TYF; Abraham N; Takei F
  • Conference publication: BLOOD. 2015;126(23):5228
    Martinez-Hoyer S; Docking R; Chan S; Jadersten M; Parker J; Karsan A
  • Review: IMMUNOLOGY AND CELL BIOLOGY. 2015;93(9):780-788
    Coquet JM; Rausch L; Borst J
  • Article: IMMUNITY. 2015;43(2):318-330
    Coquet JM; Schuijs MJ; Smyth MJ; Deswarte K; Beyaert R; Braun H; Boon L; Hedestam GBK; Nutt SL; Hammad H; Lambrecht BN
  • Article: CARCINOGENESIS. 2015;36(7):792-799
    Martinez-Hoyer S; Sole-Sanchez S; Aguado F; Martinez-Martinez S; Serrano-Candelas E; Luis Hernandez J; Iglesias M; Miguel Redondo J; Casanovas O; Messeguer R; Perez-Riba M
  • Article: BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 2015;460(2):295-301
    Serrano-Candelas E; Aleman-Muench G; Sole-Sanchez S; Aubareda A; Martinez-Hoyer S; Adan J; Aranguren-Ibanez A; Pritchard MA; Soldevila G; Perez-Riba M
  • Review: TRENDS IN IMMUNOLOGY. 2015;36(3):189-195
    Martinez-Gonzalez I; Steer CA; Takei F
  • Article: PLOS ONE. 2015;10(8):e0134569
    Guasch A; Aranguren-Ibanez A; Perez-Luque R; Aparicio D; Martinez-Hoyer S; Carmen Mulero M; Serrano-Candelas E; Perez-Riba M; Fita I
  • Article: STEM CELLS AND DEVELOPMENT. 2014;23(19):2352-2363
    Martinez-Gonzalez I; Cruz M-J; Moreno R; Morell F; Munoz X; Aran JM
  • Article: IMMUNITY. 2014;40(3):425-435
    Halim TYF; Steer CA; Mathae L; Gold MJ; Martinez-Gonzalez I; McNagny KM; McKenzie ANJ; Takei F
  • Article: PLOS ONE. 2014;9(1):e85539
    Serrano-Candelas E; Farre D; Aranguren-Ibanez A; Martinez-Hoyer S; Perez-Riba M
  • Article: CLINICAL & TRANSLATIONAL IMMUNOLOGY. 2013;2(10):e6
    Coquet JM; Skak K; Davis ID; Smyth MJ; Godfrey DI
  • Article: AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY. 2013;49(4):552-562
    Martinez-Gonzalez I; Roca O; Masclans JR; Moreno R; Salcedo MT; Baekelandt V; Cruz MJ; Rello J; Aran JM
  • Article: BIOCHIMICA ET BIOPHYSICA ACTA: INTERNATIONAL JOURNAL OF BIOCHEMISTRY AND BIOPHYSICS. 2013;1833(10):2311-2321
    Martinez-Hoyer S; Aranguren-Ibanez A; Garcia-Garcia J; Serrano-Candelas E; Vilardell J; Nunes V; Aguado F; Oliva B; Itarte E; Perez-Riba M
  • Article: JOURNAL OF EXPERIMENTAL MEDICINE (JEM). 2013;210(4):715-728
    Coquet JM; Ribot JC; Babala N; Middendorp S; van der Horst G; Xiao Y; Neves JF; Fonseca-Pereira D; Jacobs H; Pennington DJ; Silva-Santos B; Borst J
  • Article: IMMUNITY. 2013;38(1):53-65
    Coquet JM; Middendorp S; van der Horst G; Kind J; Veraar EAM; Xiao Y; Jacobs H; Borst J
  • Article: STEM CELLS AND DEVELOPMENT. 2012;21(18):3270-3277
    Martinez-Gonzalez I; Moreno R; Petriz J; Gratacos E; Aran JM
  • Article: JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY. 2012;129(4):943-54.e4
    Anto JM; Pinart M; Akdis M; Auffray C; Bachert C; Basagana X; Carlsen K-H; Guerra S; von Hertzen L; Illi S; Kauffmann F; Keil T; Kiley JP; Koppelman GH; Lupinek C; Martinez FD; Nawijn MC; Postma DS; Siroux V; Smit HA; Sterk PJ; Sunyer J; Valenta R; Valverde S; Akdis CA; Annesi-Maesano I; Ballester F; Benet M; Cambon-Thomsen A; Chatzi L; Coquet J; Demoly P; Gan W; Garcia-Aymerich J; Gimeno-Santos E; Guihenneuc-Jouyaux C; Haahtela T; Heinrich J; Herr M; Hohmann C; Jacquemin B; Just J; Kerkhof M; Kogevinas M; Kowalski ML; Lambrecht BN; Lau S; Carlsen KCL; Maier D; Momas I; Noel P; Oddie S; Palkonen S; Pin I; Porta D; Punturieri A; Ranciere F; Smith RA; Stanic B; Stein RT; van de Veen W; van Oosterhout AJM; Varraso R; Wickman M; Wijmenga C; Wright J; Yaman G; Zuberbier T; Bousquet J
  • Article: STEM CELLS AND DEVELOPMENT. 2012;21(2):284-295
    Moreno R; Martinez-Gonzalez I; Rosal M; Nadal M; Petriz J; Gratacos E; Aran JM
  • Article: PLOS ONE. 2012;7(6):e39813
    Lokk K; Vooder T; Kolde R; Välk K; Võsa U; Roosipuu R; Milani L; Fischer K; Koltsina M; Urgard E; Annilo T; Metspalu A; Tõnisson N
  • Article: MEDICAL HYPOTHESES. 2011;77(2):174-178
    Luo C; Urgard E; Vooder T; Metspalu A
  • Article: TISSUE ENGINEERING - PART C: METHODS. 2011;17(3):275-287
    Moreno R; Martinez I; Petriz J; Nadal M; Tintore X; Ramon Gonzalez J; Gratacos E; Aran JM
  • Article: CANCER INFORMATICS. 2011;10:175-183
    Urgard E; Vooder T; Võsa U; Välk K; Liu M; Luo C; Hoti F; Roosipuu R; Annilo T; Laine J; Frenz CM; Zhang L; Metspalu A
  • Article: STEM CELLS AND DEVELOPMENT. 2010;19(10):1579-1588
    Moreno R; Martinez-Gonzalez I; Rosal M; Farwati A; Gratacos E; Aran JM
  • Article: JOURNAL OF EXPERIMENTAL MEDICINE (JEM). 2010;207(2):365-378
    Zotos D; Coquet JM; Zhang Y; Light A; D'Costa K; Kallies A; Corcoran LM; Godfrey DI; Toellner K-M; Smyth MJ; Nutt SL; Tarlinton DM
  • Article: JOURNAL OF IMMUNOLOGY. 2009;183(11):7326-7336
    Sondergaard H; Coquet JM; Uldrich AP; McLaughlin N; Godfrey DI; Sivakumar PV; Skak K; Smyth MJ
  • Article: BLOOD CELLS, MOLECULES, AND DISEASES. 2009;43(2):214-220
    Moreno R; Martinez I; Petriz J; Ramon Gonzalez J; Gratacos E; Aran JM
  • Article: JOURNAL OF BIOLOGICAL CHEMISTRY. 2009;284(14):9394-9401
    Mulero MC; Aubareda A; Orzaez M; Messeguer J; Serrano-Candelas E; Martinez-Hoyer S; Messeguer A; Perez-Paya E; Perez-Riba M
  • Article: JOURNAL OF GENE MEDICINE. 2008;10(9):951-964
    Moreno R; Rosal M; Martinez I; Vilardell F; Ramon Gonzalez J; Petriz J; Hernandez-Andrade E; Gratacos E; Aran JM
  • Article: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 2008;105(32):11287-11292
    Coquet JM; Chakravarti S; Kyparissoudis K; McNab FW; Pitt LA; McKenzie BS; Berzins SP; Smyth MJ; Godfrey DI
  • Article: JOURNAL OF IMMUNOLOGY. 2008;180(11):7097-7101
    Coquet JM; Chakravarti S; Smyth MJ; Godfrey DI
  • Article: HUMAN MUTATION. 2008;29(5):738-749
    Gene GG; Llobet A; Larriba S; de Semiri D; Martinez I; Escalada A; Solsona C; Casals T; Aran JM
  • Article: JOURNAL OF IMMUNOLOGY. 2007;178(5):2827-2834
    Coquet JM; Kyparissoudis K; Pellicci DG; Besra G; Berzins SP; Smyth MJ; Godfrey DI
  • Review: CURRENT TOPICS IN MICROBIOLOGY AND IMMUNOLOGY. 2007;314:293-323
    Swann JB; Coquet JMC; Smyth MJ; Godfrey DI
  • Article: JOURNAL OF EXPERIMENTAL MEDICINE (JEM). 2005;202(9):1279-1288
    Crowe NY; Coquet JM; Berzins SP; Kyparissoudis K; Keating R; Pellicci DG; Hayakawa Y; Godfrey DI; Smyth MJ
  • Article: JOURNAL OF IMMUNOLOGY. 2005;175(7):4416-4425
    Pellicci DG; Hammond KJL; Coquet J; Kyparissoudis K; Brooks AG; Kedzierska K; Keating R; Turner S; Berzins S; Smyth MJ; Godfrey DI
  • Show more

Funding

Jonathan is and has been supported by funding from the Swedish Research Council, Cancerfonden, Barncancerfonden, KI foundations, Ollie and Elof Ericsson Stiftelse, Klas Groschinsky foundation and Sagens Stiftelse.

Staff and contact

Group leader

All members of the group

Itziar Martinez Gonzalez Project

Immunological memory of Innate Lymphoid Cells

Our research interests are focused in the study of the biology of memory Group 2 Innate Lymphoid Cells (ILC2s) in type 2 immunity.

Research focus

ILC2s are innate lymphocytes involved in type 2 immune responses that protect us against parasites and play a role in tissue repair. However, they can also be pathogenic and induce allergic reactions. I described that ILC2s can become long-lived memory cells and mount more vigorous type 2 immune responses upon subsequent activation. The antigen non-specific nature of memory ILC2s has led me to hypothesize that these cells could be connecting unrelated allergic reactions as well as mediating allergen-independent exacerbations in allergic diseases.

We will perform an in-depth study of the transcriptome, proteome and epigenome of memory ILC2s in both mouse models of allergy and samples from allergic patients. We aim to understand how these innate lymphocytes contribute to allergic diseases and ultimately help in the development of novel therapeutic approaches.

Selected publications


van der Ploeg EK, Golebski K, van Nimwegen M, Fergusson JR, Heesters BA, Martinez-Gonzalez I, Kradolfer CMA, van Tol S, Scicluna BP, de Bruijn MJW, de Boer GM, Tramper-Stranders GA, Braunstahl GJ, van IJcken WFJ, Nagtegaal AP, van Drunen CM, Fokkens WJ, Huylebroeck D, Spits H, Hendriks RW, Stadhouders R, Bal SM
Sci Immunol 2021 Jan;6(55):


Ghaedi M, Shen ZY, Orangi M, Martinez-Gonzalez I, Wei L, Lu X, Das A, Heravi-Moussavi A, Marra MA, Bhandoola A, Takei F
J Exp Med 2020 03;217(3):


Martinez-Gonzalez I, Ghaedi M, Steer CA, Mathä L, Vivier E, Takei F
Immunol Rev 2018 05;283(1):41-53


Martinez-Gonzalez I, Ghaedi M, Steer CA, Mathä L, Vivier E, Takei F
Immunol Rev 2018 05;283(1):41-53


Sugita K, Steer CA, Martinez-Gonzalez I, Altunbulakli C, Morita H, Castro-Giner F, Kubo T, Wawrzyniak P, Rückert B, Sudo K, Nakae S, Matsumoto K, O'Mahony L, Akdis M, Takei F, Akdis CA
J Allergy Clin Immunol 2018 01;141(1):300-310.e11


Steer CA, Martinez-Gonzalez I, Ghaedi M, Allinger P, Mathä L, Takei F
J Allergy Clin Immunol 2017 08;140(2):593-595.e3


Martinez-Gonzalez I, Mathä L, Steer CA, Ghaedi M, Poon GF, Takei F
Immunity 2016 07;45(1):198-208


Ghaedi M, Steer CA, Martinez-Gonzalez I, Halim TYF, Abraham N, Takei F
Cell Rep 2016 Apr;15(3):471-480


Martinez-Gonzalez I, Steer CA, Takei F
Trends Immunol 2015 Mar;36(3):189-95


Halim TY, Steer CA, Mathä L, Gold MJ, Martinez-Gonzalez I, McNagny KM, McKenzie AN, Takei F
Immunity 2014 Mar;40(3):425-35

Funding sources

  • VR Starting grant
  • Wallenberg Academy Fellow
  • KI Assistant professor position
  • Jeansson Stilftese
  • Sanofi Type 2 Innovation Grant

Group members

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Laura Mathä

Postdoctoral researcher

Sergio Martinez Hoyer Project

My research aims to understand the cellular and molecular mechanisms underlying the biology and response to therapy in bone marrow diseases, with a focus on myeloid malignancies.

Currently, we are working on two projects:

  1. Role of innate lymphoid cells in bone marrow fibrosis. Specific genetic alterations in the hematopoietic stem cell compartment can lead to the development of scar tissue in the bone marrow, which then loses its ability to support normal hematopoiesis. Previous work has demonstrated a role for innate lymphocytes in the development of fibrosis in different organs. I am exploring the contribution of innate lymphoid cells to the formation of fibrotic tissue in a mouse model of bone marrow fibrosis.
     
  2. Identification of novel therapeutic targets in drug resistant myelodysplastic syndromes. My previous work on resistant MDS described the molecular mechanisms by which malignant cells escape the activity of lenalidomide in the bone marrow. Proof of principle experiments revealed that it should be possible to overcome drug resistance in mutated cells. Using a functional genomics approach on cell lines and primary tissue, we aim to identify novel therapeutic targets that effectively eliminate relapsed malignant cells.

 

Recent publications


Docking TR, Parker JDK, Jädersten M, Duns G, Chang L, Jiang J, Pilsworth JA, Swanson LA, Chan SK, Chiu R, Nip KM, Mar S, Mo A, Wang X, Martinez-Høyer S, Stubbins RJ, Mungall KL, Mungall AJ, Moore RA, Jones SJM, Birol İ, Marra MA, Hogge D, Karsan A.
Nat Commun. 2021 Apr 30;12(1):2474. 

Martinez-Høyer S, Karsan A.
Exp Hematol. 2020 Nov;91:22-31. 


Martinez-Høyer S, Deng Y, Parker J, Jiang J, Mo A, Docking TR, Gharaee N, Li J, Umlandt P, Fuller M, Jädersten M, Kulasekararaj A, Malcovati L, List AF, Hellström-Lindberg E, Platzbecker U, Karsan A.
Nat Cell Biol. 2020 May;22(5):526-533. 

 

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